Tag: oa

20/06/2016

PostDoc Project Plan invites collaborators to study how plant lice cope with variability

While Climate change steadily takes its toll, promising to raise temperatures around the world by at least 1.5 °C within the next 100 years, organisms have already started defending their species’ existence in their own ways. Possibly, such is the case of plant lice, which evoked the curiosity of PhD student Jens Joschinski with their reproductive strategy, which shifts from sexual to asexual as the days grow shorter in the autumn.

Entomologist Jens Joschinski, currently studying at the University of Würzburg, Germany, is interested in finding out to what extent this advanced reproductive strategy is affected by variable and unpredictable conditions. Do plant lice spread their risks to reduce their losses (like investors that buy hedge funds), or do they put all their eggs in one basket? If plant lice manage their risks, does this adaptation compromise fitness?

By formally publishing his research idea as a PostDoc Project Plant in the open access journal Research Ideas and Outcomes, he hopes to find fellow scientists to collaborate with, as well as a host institutions.

Plant lice reproduce asexually during summer, which means that the mother give live birth to offspring by cloning herself. Then, as the days become shorter, indicating the approaching winter, the plant lice begin to produce eggs, since only they tolerate low temperature and can overwinter. However, there is a transitional period when a fraction of the same species still produce asexual offspring, which is what made Jens Joschinski wonder if this is an intended evolutionary response to climate change.

In order to assess the link between variable climates and the transition to sexual offspring, the PhD student plans to study at least 12 plant lice clones from different environments across Europe, and induce reproductive switches under controlled laboratory conditions. Afterwards, he is to assess the fitness and the ‘cost’ of this microevolution phenomenon.

The PostDoc Project Plan is to build on Jens Joschinski’s research done as part of his doctoral thesis, which is to be submitted for publication later this year. Then, while also being trained in evolutionary biology, he concluded that the plant lice are active during the day, which explains why they suffer fitness constraints related to the shorter days.

“The intended methods leave room for collaborative side-projects beyond the study question (e.g. molecular control of photoperiodism, or sharing aphid lines from throughout Europe), so this article might be of interest to anyone working with aphids”, he points to his fellow entomologists. “In addition, I would be happy to receive feedback from experts in bet-hedging theory, phenotypic plasticity and photoperiodism.”

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Original source:

Joschinski J (2016) Benefits and costs of aphid phenological bet-hedging strategies. Research Ideas and Outcomes 2: e9580. doi: 10.3897/rio.2.e9580

Additional information:

Funding was provided by the German Research Foundation (DFG), collaborative research center SFB 1047 “Insect timing“.

31/05/201631/05/2016

50th publication in RIO Journal: Report of the first FORCE11 Scholarly Commons workshop

What if scholars, librarians, archivists, publishers and funders could restart scholarly communication all over? This was the slogan of the first FORCE11 Scholarly Commons Working Group (SCWG) workshop, which took place in February. Advocating for an open, sustainable, fair and creditable future that is technology- and business-enabled, not -led, FORCE11’s SCWG committee published a Workshop Report in the open access journal Research Ideas and Outcomes (RIO), becoming the anniversary 50th publication in the innovative research publishing platform.

The community of FORCE11, comprising scholars, librarians, archivists, publishers and research funders from around the globe, was born at the FORC Workshop held in Dagstuhl, Germany in August 2011. Ever since, the community have been working and striving together towards a change in modern scholarly communication through the effective use of information technology. Their aim has always been to facilitate the change to improved knowledge creation and sharing.

In 2016, the Scholarly Commons Working group within FORCE11 conducts two workshops in order to find the answers to the question how scholarly communication would have looked now, had it not been for the 350 years of traditional practices. They also focus on the implications of modern technology and modes of communications that could help bring the right change about.

“Too often, scholars are unaware of the origins of current practices and accept the status quo because ‘that’s how it’s done’,” the authors point out. “But what if we could start over? What if we had computers, Internet, search engines and social media, but no legacy of journals, articles, books, review systems etc.?”

The first workshop, held between 25th and 27th February in Madrid, Spain, was titled “What if we could start over?”. The second one is planned for later this year under the slogan “Putting the pieces together.”

During the three-day workshop, the fifty participants, representing experts, early career researchers and new voices from across disciplines and countries, engaged in various activities. In order to”diverge and then converge”, the participants were encouraged through a number of enjoyable tasks to freely think outside the box, assuming that the current system of scholarly communication, based on a paper-based reward system, never existed.

“Given today’s technology and the amount of money currently in the system, how would you design a system of scholarly communications (“The Scholarly Commons”), the goal of which is to maximize the accessibility and impact of scholarly works,” they were asked. “By putting us in an alternate reality with a clear charge, we sidestepped issues that often engulf such discussions: why do we publish and who do we publish for.”

At the end of the workshop, the group’s principles were ordered under five subheadings, namely:

Open and sustainable
Fair
Credit for all endeavors
Technology- and business-enabled, not -led
Governance and funding

The attendees’ ideas, visions and suggested principles were also captured in a live and interactive visualization, consisting of the participants’ virtual post-it notes, also available through Trello.

In the spirit of the workshop itself, the report is now formally published in the form of a new scholarly communication artifact. Workshop Report is only one of the various innovative research publication types, provided by the open access journal Research Ideas and Outcomes(RIO), whose aim is to acknowledge and disseminate all quality and valuable research outputs from across all stages of the research cycle.

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Original source:

Kramer B, Bosman J, Ignac M, Kral C, Kalleinen T, Koskinen P, Bruno I, Buckland A, Callaghan S, Champieux R, Chapman C, Hagstrom S, Martone M, Murphy F, O’Donnell D (2016) Defining the Scholarly Commons – Reimagining Research Communication. Report of Force11 SCWG Workshop, Madrid, Spain, February 25-27, 2016. Research Ideas and Outcomes 2: e9340. doi: 10.3897/rio.2.e9340

22/03/2016

Making the most out of biological observations data

Creating and maintaining a biodiversity data collection has been a much-needed worldwide exercise for years, yet there is no single standard on how to do this. This has led to a myriad of datasets often incompatible with each other. To make the most out of biodiversity data and to ensure that its use for environmental monitoring and conservation is both easy and legal, the FP7-funded EU project Building the European Biodiversity Observation Network (EU BON) published recommendations that provide consistent Europe-wide Data Publishing Guidelines and Recommendations in the EU BON Biodiversity Portal.

The report “Data Policy Recommendations for Biodiversity Data. EU BON Project Report” featured in the Research Ideas & Outcomes (RIO) journal, is the first contribution in a pioneering comprehensive project outputs compilation taking advantage of RIO’s unique option to publish collections of project results.

Biodiversity data and information provide important knowledge for many biological, geological, and environmental research disciplines. Additionally, they are crucial for the development of strong environmental policies and the management of natural resources. Information management systems can bring together a wealth of information and a legacy of over 260 years of biological observations which are now dispersed in a myriad of different documents, institutions, and locations.

EU BON aims to build a comprehensive “European Biodiversity Portal” that will incorporate currently scattered Europe-wide biodiversity data, while at the same time helping to realize a substantial part of the worldwide Group on Earth Observations Biodiversity Observation Network (GEO BON). To achieve this ambitious plan, EU BON identifies the strong need for a coherent and consistent data policy in Europe to increase interoperability of data and make its re-use both easy and legal.

“Biodiversity data and information should not be treated as commercial goods, but as a common resource for the whole human society. The EU BON data sharing agreement is an important step in this direction,” comments the lead author of the report Dr. Willi Egloff from Plazi, Switzerland.

In its report, the EU BON project analysis available single recommendations and guidelines on different topics. On this basis, the report provides structured guidelines for legislators, researchers, data aggregators, funding agencies and publishers to be taken into consideration towards providing standardized, easy-to-find, re-shareable and re-usable biodiversity data.

“We are extremely happy that EU BON is among the first to take advantage of our project outputs collections option in RIO. The first report they are publishing with us deals with issues of opening up data, and digitizing and collecting scientific knowledge, all close to RIO’s mission to open up the research process and promote open science,” says Prof. Lyubomir Penev, Founder and Publisher of RIO.

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Original Source:

Egloff W, Agosti D, Patterson D, Hoffmann A, Mietchen D, Kishor P, Penev L (2016) Data Policy Recommendations for Biodiversity Data. EU BON Project Report. Research Ideas and Outcomes2: e8458. doi: 10.3897/rio.2.e8458

About EU BON:

EU BON stands for “Building the European Biodiversity Observation Network” and is a European research project, financed by the 7th EU framework programme for research and development (FP7). EU BON seeks ways to better integrate biodiversity information and implement into policy and decision-making of biodiversity monitoring and management in the EU.